I swapped out your package for mine and winecfg runs but still with an error
wine: creating configuration directory '/root/.wine'...
err:module:import_dll Library wined3d.dll (which is needed by L"c:\\windows\\system32\\d3d8.dll") not found
err:module:import_dll Library wined3d.dll (which is needed by L"c:\\windows\\system32\\d3d9.dll") not found
wine: '/root/.wine' created successfully.
I upgraded from 0.9.37 using gslapt, would that have made any difference?
When I started using wine a few months ago someone stated that they had better luck with packages they compiled themselves. That got me started and thereafter I just installed from GSLAPT. without problems. I wondered too if reinstalling was somehow different then a fresh install.